Senior / Staff Software Engineer - Computational Chemistry / Molecular Dynamics
Genesis Molecular AI
Location
Molecular Dynamics Genesis Molecular AI Added Jan 1 Burlingame CA, USA
Type
Full-time
Posted
Jan 01, 2026
Mission
What you will drive
Genesis Molecular AI is building a world-class software team to solve problems in drug discovery through machine learning, biophysical simulation, and computational chemistry. We are looking for engineers excited to help develop new medicines and play a critical role in building out our software platform.
**You will**
•
Build and maintain complex computational chemistry workflows for drug discovery
•
Work closely with computational chemists and CADD scientists to productionize new computational methods for molecular property prediction
•
Help scale our data infrastructure to handle billions of datapoints and hundreds of thousands of parallel QM and molecular dynamics jobs
**You are**
•
A deep thinker who reasons from first principles, balances attention to detail with architectural thinking, and has an investigational curiosity to find the root cause of a problem
•
Comfortable working across all levels of the software stack, building intuitive APIs and libraries for computational chemists
•
Experienced working in the fields of computational chemistry and drug discovery
•
Experienced writing production code and driving projects to completion
**What we offer**
•
The opportunity to work on high impact tools and products that are immediately deployed to accelerate the discovery of new medicines
•
Strong technical coworkers in AI, software, and chemistry, who all have a powerful mix of intellectual curiosity and humility. The team reads and discusses 1-2 machine learning or chemistry papers every week to stay on top of the field and inspire new ideas
•
Competitive salary and equity. Medical, dental, and vision insurance, and a 401(k) program
**About Genesis Molecular AI**
Genesis Molecular AI is pioneering foundation models for molecular AI to unlock a new era of drug design and development. The company’s generative and predictive AI platform, GEMS (Genesis Exploration of Molecular Space), integrates AI and physics into industry-leading models to generate and optimize drug molecules, including the breakthrough generative diffusion model Pearl for structure prediction. Genesis has raised over $300 million from leading AI, tech and life science-focused investors, signed multiple AI-focused research collaborations with major pharma partners, and is deploying GEMS to advance an internal therapeutics pipeline for a variety of high-impact targets.
Genesis is headquartered in Burlingame, CA, with a fully integrated laboratory in San Diego. We are proud to be an inclusive workplace and an Equal Opportunity Employer.
Profile
What makes you a great fit
Genesis Molecular AI is building a world-class software team to solve problems in drug discovery through machine learning, biophysical simulation, and computational chemistry. We are looking for engineers excited to help develop new medicines and play a critical role in building out our software platform.
**You will**
•
Build and maintain complex computational chemistry workflows for drug discovery
•
Work closely with computational chemists and CADD scientists to productionize new computational methods for molecular property prediction
•
Help scale our data infrastructure to handle billions of datapoints and hundreds of thousands of parallel QM and molecular dynamics jobs
**You are**
•
A deep thinker who reasons from first principles, balances attention to detail with architectural thinking, and has an investigational curiosity to find the root cause of a problem
•
Comfortable working across all levels of the software stack, building intuitive APIs and libraries for computational chemists
•
Experienced working in the fields of computational chemistry and drug discovery
•
Experienced writing production code and driving projects to completion
**What we offer**
•
The opportunity to work on high impact tools and products that are immediately deployed to accelerate the discovery of new medicines
•
Strong technical coworkers in AI, software, and chemistry, who all have a powerful mix of intellectual curiosity and humility. The team reads and discusses 1-2 machine learning or chemistry papers every week to stay on top of the field and inspire new ideas
•
Competitive salary and equity. Medical, dental, and vision insurance, and a 401(k) program
**About Genesis Molecular AI**
Genesis Molecular AI is pioneering foundation models for molecular AI to unlock a new era of drug design and development. The company’s generative and predictive AI platform, GEMS (Genesis Exploration of Molecular Space), integrates AI and physics into industry-leading models to generate and optimize drug molecules, including the breakthrough generative diffusion model Pearl for structure prediction. Genesis has raised over $300 million from leading AI, tech and life science-focused investors, signed multiple AI-focused research collaborations with major pharma partners, and is deploying GEMS to advance an internal therapeutics pipeline for a variety of high-impact targets.
Genesis is headquartered in Burlingame, CA, with a fully integrated laboratory in San Diego. We are proud to be an inclusive workplace and an Equal Opportunity Employer.