IT Software Engineer

POSITION TITLE (ENGLISH): Software Engineer
WORKING LOCATION: Bangalore

SUMMARY OF POSITION AND OBJECTIVES:
With knowledge and experience in Bioinformatics, the candidate needs to be able to develop data analysis pipelines in a Linux based environment and be proficient in analyzing sequencing data, interpreting results, and implementing interactive solutions.

Job description:
· Project Management of Sequencing based Bioinformatics Projects including data analysis, management, consulting, and interpretation of results.
· Conceptualizing and developing customized bioinformatics solutions including interactive analysis for various sequencing based products.
· Contribute to the maintenance and development of bioinformatics tools and resources through knowledge of internally developed systems, open-source programs, and commercial applications.
· Benchmarking different tools on standard/gold standard datasets.
· Work with R&D team members to develop, implement and maintain functioning pipelines and applications
upstream and downstream of NGS data analysis, interpretation, and reporting workflows.
· Support project management team through troubleshooting and resolution of encountered issues with data
analysis and customer concerns.
· Document all aspects of the bioinformatics environment for existing systems and newly implemented
systems in a QM compliant way. Ensure versioning through a source control system of all pipelines,
configurations, algorithms, tools, and applications used in production workflows.

Requirements:
· Master's in bioinformatics or biotechnology or any other equivalent degree.
· Experience in analyzing sequencing data and interpreting results.
· Experience in the application of bioinformatics tools and the development of pipelines in the field of DNA/RNA sequencing is ideal.
· Programming experience in - Python, bash, R/ Bioconductor.
· Familiarity with Unix based operating systems, job queuing systems (eg. SGE), git, Docker and common
workflow language (CWL) based frameworks.
· Good knowledge of written and spoken English is required.
· R/ Shiny based or alternative dashboard development experience (advantage).
· Experience in cloud computing (advantage).
Methodology we have in place and expect to be used:
· Kanban, Lean, Scaled Agile, Zero-Defect development method
· Daily Stand-ups with other developers directly involved
· Scrum of Scrums, Innovation Sprints (after every 3rd Sprint)
· Continuous integration
· Automatic Build and Deployments
· Automated Unit & Functional Testing
· Follow Development guidelines and coding style

EVOLUTION:
Working in the field of Sequencing and Bio-IT Production pipeline for RNA/DNA Sequencing analysis, the potential
candidates will be having a high chance of becoming SME’s and would get a chance to manage the sequencing studies.

What we offer:
· A launch pad into various technical/management opportunities – within the many business lines of Eurofins
globally – or into the management hierarchy in our different corporate functions.

· The opportunity to grow your technical stack.
· A chance to become part of a highly motivated international team of professionals.

POSITION TITLE (ENGLISH): Software Engineer
WORKING LOCATION: Bangalore

SUMMARY OF POSITION AND OBJECTIVES:
With knowledge and experience in Bioinformatics, the candidate needs to be able to develop data analysis pipelines in a Linux based environment and be proficient in analyzing sequencing data, interpreting results, and implementing interactive solutions.

Job description:
· Project Management of Sequencing based Bioinformatics Projects including data analysis, management, consulting, and interpretation of results.
· Conceptualizing and developing customized bioinformatics solutions including interactive analysis for various sequencing based products.
· Contribute to the maintenance and development of bioinformatics tools and resources through knowledge of internally developed systems, open-source programs, and commercial applications.
· Benchmarking different tools on standard/gold standard datasets.
· Work with R&D team members to develop, implement and maintain functioning pipelines and applications
upstream and downstream of NGS data analysis, interpretation, and reporting workflows.
· Support project management team through troubleshooting and resolution of encountered issues with data
analysis and customer concerns.
· Document all aspects of the bioinformatics environment for existing systems and newly implemented
systems in a QM compliant way. Ensure versioning through a source control system of all pipelines,
configurations, algorithms, tools, and applications used in production workflows.

Requirements:
· Master's in bioinformatics or biotechnology or any other equivalent degree.
· Experience in analyzing sequencing data and interpreting results.
· Experience in the application of bioinformatics tools and the development of pipelines in the field of DNA/RNA sequencing is ideal.
· Programming experience in - Python, bash, R/ Bioconductor.
· Familiarity with Unix based operating systems, job queuing systems (eg. SGE), git, Docker and common
workflow language (CWL) based frameworks.
· Good knowledge of written and spoken English is required.
· R/ Shiny based or alternative dashboard development experience (advantage).
· Experience in cloud computing (advantage).
Methodology we have in place and expect to be used:
· Kanban, Lean, Scaled Agile, Zero-Defect development method
· Daily Stand-ups with other developers directly involved
· Scrum of Scrums, Innovation Sprints (after every 3rd Sprint)
· Continuous integration
· Automatic Build and Deployments
· Automated Unit & Functional Testing
· Follow Development guidelines and coding style

EVOLUTION:
Working in the field of Sequencing and Bio-IT Production pipeline for RNA/DNA Sequencing analysis, the potential
candidates will be having a high chance of becoming SME’s and would get a chance to manage the sequencing studies.

What we offer:
· A launch pad into various technical/management opportunities – within the many business lines of Eurofins
globally – or into the management hierarchy in our different corporate functions.

· The opportunity to grow your technical stack.
· A chance to become part of a highly motivated international team of professionals.

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